Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
model matrix
•
reset
0
votes
2
replies
1.1k
views
Model matrix for longitudinal pairwise rna-seq data: linear regression or linear mixed model?
limma
model matrix
linear regression
4.9 years ago • updated 4.8 years ago
agm
• 0
1
vote
2
replies
1.4k
views
DESeq2 design & model matrix not full rank - am I nesting correctly?
deseq2
model matrix
experimental design
multiple factor design
updated 6.3 years ago by
Michael Love
42k • written 6.3 years ago by
amye107
• 0
0
votes
7
replies
1.4k
views
Model matrix not full rank
deseq2
linear combination
model matrix
updated 6.6 years ago by
Michael Love
42k • written 6.6 years ago by
sally_b86
• 0
2
votes
4
replies
1.2k
views
Removing batch effect on edgeR when interactons are looked at
rnaseq
edger
statistics
model matrix
updated 6.6 years ago by
Steve Lianoglou
★ 13k • written 6.6 years ago by
David R
▴ 90
3
votes
6
replies
27k
views
Designing a contrast in DESEQ
deseq2
design and contrast matrix
model matrix
7.2 years ago
mrigaya.mehra
▴ 10
0
votes
8
replies
1.7k
views
DESeq2 glibc error
deseq2
differential gene expression
model matrix
updated 7.3 years ago by
Michael Love
42k • written 7.3 years ago by
gregory.l.stone
▴ 10
4
votes
6
replies
2.5k
views
Find if a covariate has effect on gene expression level using edgeR and DESeq2
edger
deseq2
model matrix
differential expression
7.7 years ago
ta65
• 0
2
votes
7
replies
3.1k
views
ballgown custom models
ballgown
linear model
model matrix
custom model
8.2 years ago • updated 8.1 years ago
sbcn
▴ 80
7
votes
6
replies
4.0k
views
Design and contrast question limma (additive or nested or duplicateCorrelation())??
limma
model matrix
limma design matrix
complex-design
updated 8.9 years ago by
Aaron Lun
★ 28k • written 8.9 years ago by
Guido Hooiveld
★ 3.9k
9
votes
2
replies
5.4k
views
Limma Model Matrix Understanding
limma
limma design matrix
model matrix
updated 9.0 years ago by
Aaron Lun
★ 28k • written 9.0 years ago by
andrew.j.skelton73
▴ 370
2
votes
5
replies
3.8k
views
design model matrix for nested factors (edgeR)
edger
design matrix
model matrix
updated 9.1 years ago by
Aaron Lun
★ 28k • written 9.1 years ago by
silvia.paolucci81
• 0
11 results • Page
1 of 1
Recent ...
Replies
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
• 0
I have performed RUVg correction and extracted W, factors of unwanted variation. According to limma guide, > In the limma approach to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
Votes
Bioconductor 3.19 is Released!
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
Awards
• All
Popular Question
to
ATpoint
★ 4.1k
Teacher
to
Michael Love
42k
Popular Question
to
Haibo Liu
• 0
Popular Question
to
HS
▴ 10
Popular Question
to
DevelopingHippo
• 0
Locations
• All
Poland,
5 minutes ago
India,
6 minutes ago
United States,
13 minutes ago
EMBL Heidelberg,
29 minutes ago
United States,
30 minutes ago
Traffic: 726 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6